Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915835.1_cds_XP_016465598.1_58537
CDS Infomation

[gene=LOC107788430] [db_xref=GeneID:107788430] [protein=agmatine deiminase-like isoform X2] [protein_id=XP_016465598.1] [location=join(15428..15514,16782..16895,16990..17079,17181..17265,18100..18155,18260..18338,18812..18946,20580..20812,21681..21839,22287..22373)] [gbkey=CDS]
Sequence

ATGGATATGAAGGGGACGCCAGCGGAAAATGGATACCGTATGCCTGCTGAATGGGAATCC
CACTCTCATTGTTGGATGGGCTGGCCTGAGCGTCCAGATAACTGGCGAAACAATGCACTC
CACGGTCAACGTGTATTTGCCAATGTAGCATCTGCTATCTCAAGATTCGAACCAGTAACA
GTCTGTGCTAGTGCTGCTCAGTGGGAAAATGCACGCAGCCAGTTACCAAAACATATCAGG
GTTGTGGAGATGAGCATGAATGATTCTTGGTTTCGTGATACTGGTCCAACTTTTGTCATC
AGAAATACCGCAGCAAATGCAGAACATGTAGCGTCGAGTGTTGCAGGAATTGATTGGACC
TTCAATAGCTGGGGTGGTGTTGATGATGGATGTTACGAAGACTGGAGTCATGACCTTCTT
GTTGCAAGAAAGATTTTGGCAATTGAAAAGGTCCCAAGGTTTCCACACTCTATGATTCTT
GAAGGTGGAAGCATTCATGTCGATGGAGAAGGGACTTGTCTCACGACAGAAGAGTGCCTC
CTGAACAAAAACAGGAACCCCCATTTGTCTAAGGAACAAATTGAGAATGAACTAAAGGCA
TATCTTGGAGTCAGGAAGATTATTTGGCTGCCTCGAGGGTTGTTTGGTGATGATGATACA
AATGGTCATATTGACAACATGTGCTGTTTTGTGAAGCCTGGTGTTGTTTTATTGTCATGG
ACCGATGATCAATCTGATCCACAGTATGAGAGATCCATTGAAGCCCTTTCTATTCTTGAA
ACTACTTCTGATGCGAATGGTAGAAAACTACAAGTGATCAAACTCCATGTACCTGGGCCA
CTCTGTATGACAGATGAGGAGGCAGATGGAATATTTCAGGATGGTGATGCAAAACCTAGG
ACTTCAGGTACAAGGCTTGCTGCTTCGTACGTAAACTTCTACATTGCCAATGGCGCTATT
ATTACTCCACAATTTGGGGACAAAAAATGGGATGAAGAAGCTATTAGAGTCCTCTCACTG
GCGTTTCCAGATCATGAGGTGGTAGGAATTGAAGGTGCAAGGGAGATTGTATTGGGAGGT
GGCAATATACATTGTATCACGCAGCAGCAGCCAACCGGTCCATAA

Peptide Sequence

PEP ID

XP_016465598.1
PEP Infomation

PREDICTED: agmatine deiminase-like isoform X2 [Nicotiana tabacum]
Sequence

MDMKGTPAENGYRMPAEWESHSHCWMGWPERPDNWRNNALHGQRVFANVASAISRFEPVT
VCASAAQWENARSQLPKHIRVVEMSMNDSWFRDTGPTFVIRNTAANAEHVASSVAGIDWT
FNSWGGVDDGCYEDWSHDLLVARKILAIEKVPRFPHSMILEGGSIHVDGEGTCLTTEECL
LNKNRNPHLSKEQIENELKAYLGVRKIIWLPRGLFGDDDTNGHIDNMCCFVKPGVVLLSW
TDDQSDPQYERSIEALSILETTSDANGRKLQVIKLHVPGPLCMTDEEADGIFQDGDAKPR
TSGTRLAASYVNFYIANGAIITPQFGDKKWDEEAIRVLSLAFPDHEVVGIEGAREIVLGG
GNIHCITQQQPTGP

Transcript Sequence

Gene sequence data has not been registered.